The Administration of Criminal Justice System is not a new concept. Administration of justice is a very wide subject. It is not only the judiciary which is responsible for the administration of justice but the legislature and the executive also play an equally important role. The Courts of law come into picture at a later stage to decide the right or wrong of a dispute whether civil or criminal. Administration of justice becomes the most important job of the state which implies the support of right within a political society by means of the physical strength of the state. Justice is administered through the judicial organ of the government. Justice is administered according to law and the Courts of Justice plays the vital role in the administration of justice. Theories of punishments plays an important role in achieving the goal of the administration of Criminal Justice System. There is a deep relationship between the theories of punishment and criminal justice system. To proper maintenance of criminal justice system, such theories give new thoughts to the courts to proper administration of justice.